2012-13 Pomona College Catalog 
    
    Jun 16, 2024  
2012-13 Pomona College Catalog [ARCHIVED CATALOG] Use the dropdown above to select the current 2023-24 catalog.

Courses


Check major and minor requirement sections in the Departments, Programs and Areas of Study section to determine if specific courses will satisfy requirements. Inclusion on this list does not imply that the course will necessarily satisfy a requirement.

Click here  to view a Key to Course Listings and Discipline codes.

 

Asian Studies

  
  • ASIA 190 PO - Senior Thesis Seminar


    CrsNo ASIA190 PO


    When Offered: Each fall.

    Instructor(s): S. Yamashita

    Exclusively for Asian studies majors who are preparing to write a senior thesis. Letter grade only.

  
  • ASIA 191 PO - Senior Thesis


    CrsNo ASIA191 PO


    When Offered: Each semester.

    Instructor(s): Staff

    Senior Thesis

  
  • ASIA 199DRPO - Asian Studies: Directed Readings


    CrsNo ASIA199DRPO


    When Offered: Each semester.

    Instructor(s): Staff

    Syllabus reflects workload of a standard course in the department or program. Examinations or papers equivalent to a standard course. Regular interaction with the faculty supervisor. Weekly meetings are the norm. Available for full- or half-course credit.

  
  • ASIA 199IRPO - Asian Studies: Independent Research


    CrsNo ASIA199IRPO


    When Offered: Each semester.

    Instructor(s): Staff

    A substantial and significant piece of original research or creative product produced. Pre-requisite course work required. Available for full- or half-course credit.

  
  • ASIA 199RAPO - Asian Studies: Research Assistantship


    CrsNo ASIA199RAPO


    When Offered: Each semester.

    Instructor(s): Staff

    Lab notebook, research summary or other product appropriate to the discipline is required. Half-course credit only.


Astronomy

  
  • ASTR 001 PO - Introductory Astronomy with Lab


    CrsNo ASTR001 PO


    When Offered: Each fall.

    Instructor(s): Staff

    A non-calculus based survey course on modern astronomy with a focus on stellar, galactic and cosmic evolution. Particular emphasis will be placed on new and exciting observational results from space and ground-based observatories and how they shape our contemporary understanding of the formation and evolution of the universe and solar system. Includes a laboratory component with telescope.

  
  • ASTR 002 PO - Introduction to Galaxies and Cosmology


    CrsNo ASTR002 PO


    When Offered: Last offered spring 2009.

    A non-calculus introduction to cosmology. Topics will include our Milky Way galaxy, galaxy classification and evolution, historical perspectives on cosmology, an examination of the large scale structure of the universe and the history of the universe from the big bang to the present. Modern results and problems in cosmology will be examined.

  
  • ASTR 003 PO - Life in the Universe


    CrsNo ASTR003 PO


    When Offered: Spring 2013.

    Instructor(s): M. Lazarova

    Life in the Universe. Interdisciplinary seminar on origin of life on Earth and possibility for life elsewhere in the universe. Emphasizes individualized and group research and learning. Topics include the creation of the universe and cosmology, the evolution of galaxies and stars, the interstellar medium and the formation of solar systems, the origin and evolution of life on Earth, and the search for extrasolar planets and extraterrestrial life and intelligence.

  
  • ASTR 006 PO - Archeoastronomy and World Cosmology


    CrsNo ASTR006 PO


    When Offered: Last offered spring 2012.

    Instructor(s): B. Penprase

    A survey of the development of astronomy and cosmology around the world. Explores the role of astronomy and cosmology in organizing society and culture and in interpreting time and space. Additional topics include details of the cosmological systems of the ancient Mesoamerican, Greek and Chinese civilizations and a non-mathematical exploration of modern scientific cosmology. (Astronomy)

  
  • ASTR 009 PO - Cosmic Origins


    CrsNo ASTR009 PO


    When Offered: Last offered fall 2011.

    Instructor(s): B. Penprase

    The Cosmic Origins of the Universe - the Stars, the Elements and Earth. A survey of the origins of the universe, the formation of the first elements and stars, and the production of planets. The “cosmic context” of life on Earth is considered, with a detailed discussion of the origins of the elements, exoplanets, the Anthropic principle, and the uniqueness of Earth as a planet. Includes a laboratory/observatory component. No prerequisites. Letter grade only. (Astronomy)

  
  • ASTR 051 PO - Advanced Introductory Astronomy


    CrsNo ASTR051 PO


    When Offered: Each spring.

    Instructor(s): P. Choi

    Provides an overview of the modern science of astrophysics. Theoretical and experimental evidence for the hot Big Bang, the formation of elements and the solar system and stellar evolution; exposition of the most pressing issues in the field of astronomy and astrophysics. Students design investigations and conduct a final project based on research in literature or observational studies in astronomy. Prerequisites: AP Physics or PHYS 041 PO  or PHYS 070 PO  or permission of the instructor.

  
  • ASTR 062 PO - Introduction to Astrophysics


    CrsNo ASTR062 PO


    When Offered: Each spring.

    Instructor(s): Staff

    Introduction to astrophysics with emphasis on topics of interest to students with a strong background in introductory physics. Topics include astronomical coordinate systems, celestial mechanics, solar physics, stellar structure, stellar evolution and cosmology. Prerequisite: PHYS 101 PO. (Astronomy)

  
  • ASTR 101 PO - Techniques in Observational Astrophysics


    CrsNo ASTR101 PO


    When Offered: Each fall.

    Instructor(s): P. Choi

    A course emphasizing techniques of visual, photographic and electronic observations of astronomical objects. Discussion of infrared and radio astronomy, as well as space-based UV and X-ray astronomy. Includes preparation for and data reductions of observations. Also includes original astronomical observations using both the Brackett Observatory and the one-meter telescope at Table Mountain. Prerequisites: PHYS 101 PO (can be taken concurrently); and ASTR 051 PO  or ASTR 062 PO . Offered jointly with Harvey Mudd and Joint Sciences. (Astronomy)

  
  • ASTR 120 PO - Star Formation & Interstellar Medium


    CrsNo ASTR120 PO


    When Offered: Last offered spring 2010.

    Instructor(s): B. Penprase

    Star Formation and the Interstellar Medium. A survey of the formation of stars and planets in the universe, the galactic interstellar medium and the theoretical and observational aspects of understanding the conditions and evolution of matter in the galaxy. Half-course. Prerequisites: PHYS 101 PO , MATH 060 PO  and ASTR 001 PO  or ASTR 062 PO  and PHYS 101 PO  . Offered jointly with HM and Joint Sciences. Spring 2008; offered alternate years.”

  
  • ASTR 121 PO - Cosmology and Extragalactic Astrophysics


    CrsNo ASTR121 PO


    When Offered: Offered alternate years; next offered spring 2014.

    Instructor(s): Staff

    Examination of large-scale structure of the universe and evolution of the universe from Big Bang to present epoch. Topics include alternate cosmologies, dark matter, cosmic background radiation and formation and evolution of galaxies and clusters of galaxies. Half-course. Prerequisites: ASTR 051 PO  and PHYS 101 PO  or ASTR 062 PO  and PHYS 101 PO , or permission of the instructor. Offered jointly with Harvey Mudd and Joint Sciences.

  
  • ASTR 122 PO - High-Energy Astrophysics


    CrsNo ASTR122 PO


    When Offered: Offered alternate years; next offered spring 2013.

    Instructor(s): Staff

    Analysis of the results of new ultraviolet, X-ray and gamma-ray observations and the astrophysical processes that produce high-energy photons. Topics include active galactic nuclei, black holes, neutron stars, supernova remnants and cosmic rays. Half-course. Prerequisites:  PHYS 101 PO  and either ASTR 051 PO  or ASTR 062 PO , or permission of the instructor. Offered jointly with Harvey Mudd and Joint Sciences.

  
  • ASTR 123 PO - Stellar Structure and Evolution


    CrsNo ASTR123 PO


    When Offered: Offered alternate years; next offered spring 2013.

    Instructor(s): Staff

    A rigorous treatment of stellar atmospheres and radiative transfer. Topics include stellar energy generation, evolution on and away from the main sequence and the internal structures of stars and other self-gravitating objects. Prerequisites: PHYS 101 PO  and either ASTR 051 PO  or ASTR 062 PO , or permission of the instructor. Offered jointly with Harvey Mudd and Joint Sciences.

  
  • ASTR 199DRPO - Astronomy: Directed Readings


    CrsNo ASTR199DRPO


    When Offered: Each semester.

    Instructor(s): Staff

    Directed Readings. Syllabus reflects workload of a standard course in the department or program. Examinations or papers equivalent to a standard course. Regular interaction with the faculty supervisor. Weekly meetings are the norm. Available for full- or half-course credit.

  
  • ASTR 199IRPO - Astronomy: Independent Research


    CrsNo ASTR199IRPO


    When Offered: Each semester.

    Instructor(s): Staff

    Independent Research or Creative Project. A substantial and significant piece of original research or creative product produced. Pre-requisite course work required. Available for full- or half-course credit.

  
  • ASTR 199RAPO - Astronomy:Research Assistantship


    CrsNo ASTR199RAPO


    When Offered: Each semester.

    Instructor(s): Staff

    Research Assistantship. Lab notebook, research summary or other product appropriate to the discipline is required. Half-course credit only.


Biology

  
  • BIOL 001A PO - Human Genetics for Non-Majors


    CrsNo BIOL001A PO


    When Offered: Spring 2013.

    Instructor(s): D. Martinez; L. Seligman

    Principles and practices of human genetics and current problems and social issues related to genetic research. For non-majors. Cannot be taken if student has already taken BIOL 040 PO.

  
  • BIOL 001C PO - Biology of Garden Plants


    CrsNo BIOL001C PO


    When Offered: Last offered spring 2010.

    Topics include life cycle of flowering plants, plant structures and functions, nutrition, transport of materials, photosynthesis, mechanisms for sensing the environment, propagation methods and plant pests. Societal aspects of gardening and farming discussed. Laboratory-rich course includes much hands-on experience growing and assessing plants. Not intended for science majors.

  
  • BIOL 001D PO - Ecology for Non-Majors


    CrsNo BIOL001D PO


    When Offered: Last offered fall 2010.

    Instructor(s): F. Hanzawa

    Introduction to the major concepts of population and community ecology. Topics include demography; factors governing population growth; predator-prey, competitive and mutualistic interactions; and the organization of communities. Integrates lecture, discussion and laboratory. One required field trip. Not intended for science majors.

  
  • BIOL 001H PO - Cloning & Stem Cells for Non-Majors


    CrsNo BIOL001H PO


    When Offered: Offered alternate years; next offered spring 2014.

    Instructor(s): L. Hoopes

    Reading and discussion on current issues in cloning of animals and humans and stem cell research; not for majors in biology and molecular biology.

  
  • BIOL 002A PO - Biology, Gender and Society


    CrsNo BIOL002A PO


    When Offered: Fall 2012.

    Instructor(s): Levin

    This course explores the scientific method in the fields of genetics, endocrinology, physiology, development and evolution to see how biology informs our understanding of gender and identity. Discussion focuses on the uses and abuses of the information generated by biological research and how science changes as cultural values and the political climate shift. Concurrent requisite: BIOL002ALPO.

  
  • BIOL 039L JS - Analyses of Human Motor Skills


    CrsNo BIOL039L JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 040 PO - Introductory Genetics w/Lab


    CrsNo BIOL040 PO


    When Offered: Each fall.

    Instructor(s): A. Cavalcanti; C. Cheney; D. Martinez; L. Seligman

    Coverage of the principles of heredity. Topics include transmission genetics, population genetics and molecular genetics. Laboratory provides opportunities for students to apply a range of experimental approaches to ask and answer genetic questions in a variety of model organisms. No prerequisite.

  
  • BIOL 041C PO - Intro Cell Chemistry & Cell Biology with Lab


    CrsNo BIOL041C PO


    When Offered: Each spring.

    Instructor(s): D. Becker; K. Johnson; B. Telzer

    Introduction to components of and processes that occur in living cells. Includes cell chemistry, intermediary metabolism, energy transduction and specialized topics, including protein trafficking, cellular motility and signal transduction. Prerequisites: BIOL 040 PO  and either CHEM 001A PO  or CHEM 051 PO .

  
  • BIOL 041E PO - Intro Ecology & Evolutionary Biology with Lab


    CrsNo BIOL041E PO


    When Offered: Each spring.

    Instructor(s): F. Hanzawa; N. Karnovsky; R. Levin; J. Wright

    Introduction to the origins of and interactions among organisms in their natural environments. Includes evolutionary and population biology, behavioral and community ecology and conservation biology. Laboratory projects include field experiments and apply statistical treatments in data analysis. Prerequisite: BIOL 040 PO .

  
  • BIOL 069L JS - Discovery, Innovation and Risk


    CrsNo BIOL069L JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 071L JS - Biotechnology


    CrsNo BIOL071L JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 104 PO - Conservation Biology


    CrsNo BIOL104 PO


    When Offered: Each spring.

    Instructor(s): G. Fowler

    Biological approaches to the conservation of species and ecosystems. Topics include current problems in conservation at global through local scales, the origin and maintenance of biodiversity, population dynamics of rare or exploited species and the influence of human values on wildlife conservation. Prerequisites: BIOL 041E PO  or EA  051  PO or equivalent.

  
  • BIOL 106 PO - Aquatic Ecology


    CrsNo BIOL106 PO


    When Offered: Offered alternate years; next offered spring 2014.

    Instructor(s): N. Karnovsky

    Covers the ecology of marine, estuarine, and freshwater habitats. Investigates how the physical and chemical properties of both salt and freshwater environments impact the distribution, abundance, behavior and inter-species interactions of aquatic organisms. Investigates the impact of anthropogenic activities on aquatic organisms. Lectures and discussions of primary literature. Experiments in lab and field. Field trips are required. Prerequisite:BIOL 041E PO . Letter grade only.

  
  • BIOL 109 PO - Molecular Evolution: The Tree of Life


    CrsNo BIOL109 PO


    When Offered: Spring 2013.

    Instructor(s): D. Martinez

    This course examines the major transitions in the evolution of life on Earth from a molecular perspective. Topics include the evolution of the eukaryotic nucleus, the evolution of mitochondria, the evolution of chloroplasts, the evolution of introns, the evolution of higher plants, the Cambrian explosion and the origin of animals and the evolution of tetrapods. Laboratory introduces students to a variety of molecular biology techniques. Computer lab emphasizes sequence assemblage, sequence alignment and phylogenetic reconstruction. Prerequisite: BIOL 041C PO  or BIOL 041E PO .

  
  • BIOL 116 PO - Ecology/Evolution of Plants with Lab


    CrsNo BIOL116 PO


    When Offered: Spring 2013.

    Instructor(s): F. Hanzawa

    The ecology of plant populations, examined in an evolutionary context. Topics include population dynamics; ecology and evolution of interactions between plants and pollinators, herbivores and seed dispersers; evolution of plant structure; conservation of rare species. Prerequisite: BIOL 041E PO .

  
  • BIOL 121 PO - Insect Ecology & Behavior with Lab


    CrsNo BIOL121 PO


    When Offered: Fall 2013.

    Instructor(s): F. Hanzawa

    This course explores the interaction of insects with their biotic and physical environments from an evolutionary perspective. Topics include insect population ecology; mating, foraging and social behaviors; ecology of insect pollination, herbivory and parasitism; and insect diversity. Prerequisite: BIOL 041E PO .

  
  • BIOL 125 PO - Animal Behavior with Laboratory


    CrsNo BIOL125 PO


    When Offered: Fall 2012.

    Instructor(s): R. Levin

    This course examines maintenance, reproductive and social behaviors of animals from evolutionary, ecological and mechanistic perspectives. Topics include behavioral ecology and sociobiology, behavioral genetics, behavioral endocrinology and neuroethology. Laboratory includes field observations of free-living animals. Prerequisite: BIOL 041E PO  or permission of instructor.

  
  • BIOL 131 PO - Invertebrate Biology with Lab


    CrsNo BIOL131 PO


    When Offered: Last offered spring 2012.

    Instructor(s): J. Wright

    Explores the taxonomy, phylogeny and functional morphology of the major invertebrate phyla. Select topics include some of the most pervasive evolutionary questions: insect-plant co-evolution, the evolution and biomechanics of insect flight, host-parasite co-evolution and the Cambrian explosion. Laboratories explore comparative anatomy, physiology and ecology through a combination of experimental and observational projects and field trips. Prerequisite: BIOL 041C PO  or BIOL 041E PO .

  
  • BIOL 132 PO - Vertebrate Biology with Lab


    CrsNo BIOL132 PO


    When Offered: Offered alternate years; next offered fall 2013.

    Instructor(s): N. Karnovsky

    Vertebrate ecology, evolution and current conservation crises. Aspects of vertebrate anatomy and physiology will be covered to highlight strategies vertebrates use to meet challenges of metabolism, thermoregulation, locomotion, prey capture, predator avoidance, mating, reproduction and migration. Labs are focused on modern techniques for studying vertebrate populations. Field trips. Prerequisite: BIOL 041E PO .

  
  • BIOL 133L JS - Intro to Mathematical Physiology


    CrsNo BIOL133L JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 140 PO - Animal Physiology with Laboratory


    CrsNo BIOL140 PO


    When Offered: Each fall.

    Instructor(s): J. Wright

    The physiology of animals at the biochemical, cellular, organ and whole-animal level, stressing comparative solutions to common problems across animal groups. Prerequisite: BIOL 041C PO  .

  
  • BIOL 144 PO - Comparative Endocrinology


    CrsNo BIOL144 PO


    When Offered: Each fall.

    Instructor(s): G. Fowler

    Examines the role of the endocrine system in regulating physiology and the maintenance of homeostasis in whole organisms. Topics include osmoregulation, digestion, reproduction, behavior and responses to environmental changes, as well as mechanisms of chemical communication. Prerequisite: BIOL 041C PO  or BIOL 041E PO .

  
  • BIOL 146L JS - Ecology


    CrsNo BIOL146L JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 153 HM - Biostatistics


    CrsNo BIOL153 HM


    See the Harvey Mudd Catalog for a description of this course.

  
  • BIOL 159 JS - Natural Resource Management


    CrsNo BIOL159 JS


    See the Scripps College catalog for a description of this course.

  
  • BIOL 160 PO - Immunology


    CrsNo BIOL160 PO.


    When Offered: Fall 2013.

    Instructor(s): S. Stranford

    This course will cover the cells, organs, and biochemical signals that make up the immune system, as well as mechanisms for the identification and removal of pathogens. Additional topics may include: autoimmunity, allergy, vaccination, transplantation, cancer, immune deficiency, and pathogen evasion strategies. Emphasis will be placed on the human immune response, with occasional use of clinical case studies to reinforce these ideas. In addition, common experimental models will also be discussed. In the final section of the course, students will be expected to deliver an oral presentation on an immunology topic of interest. Prerequisites: BIOL 040 PO  and BIOL 041C PO .

  
  • BIOL 163 PO - Advanced Cell Biology with Lab


    CrsNo BIOL163 PO


    When Offered: Each fall.

    Instructor(s): S. Olson

    Discussion of the organization, function and biochemistry of the organelles and macromolecules of eukaryotic cells. Special emphasis will be given to cell membranes, protein synthesis and trafficking among organelles and intracellular motility. Prerequisite: BIOL 041C PO .

  
  • BIOL 165 JS - Advanced Topics in Environmental Biology


    CrsNo BIIOL165 JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 165 PO - Genetic Regulation Seminar


    CrsNo BIOL165 PO


    When Offered: Spring 2013.

    Genetic Regulation Seminar. Reading and discussion of classic and current papers from the research literature on genetic regulation. Prerequisite: BIOL 041C PO  or equivalent. Letter grade only.

  
  • BIOL 165A PO - Molecular Genetics of Cancer


    CrsNo BIOL165A PO


    When Offered: Last offered fall 2008.

    Instructor(s): L. Seligman

    This course examines the genetic changes that underlie the conversion of healthy cells to cancer cells. Emphasis will be placed on studies identifying key genes in humans, as well as research in model organisms that has enabled an understanding of how changes in these genes lead to cancers. This is a literature-based course that emphasizes oral presentations. Juniors and seniors only. Prerequisite: BIOL 040 PO  and BIOL 041C PO  or permission of the instructor.

  
  • BIOL 166 JS - Animal Physiological Ecology


    CrsNo BIOL166 JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 166 PO - Plant Physiology With Laboratory


    CrsNo BIOL166 PO


    When Offered: Spring 2013.

    The physiology and biochemistry unique to plants, with emphasis on mechanisms. Whole-plant processes such as mineral uptake and transport and water relations and intracellular processes such as photosynthesis, nitrogen metabolism, cell-wall synthesis and synthesis of secondary compounds. Mechanisms for coping with environmental stresses. Prerequisite: BIOL 041C PO .

  
  • BIOL 169 PO - Developmental Biology with Laboratory


    CrsNo BIOL169 PO


    When Offered: Each spring.

    Instructor(s): C. Cheney

    The events and processes of animal development, including early development, organogenesis, signaling, developmental genetics, cloning, imprinting, stem cells and evolution of development. Includes both vertebrate and invertebrate embryos. Prerequisite: BIOL 041C PO .

  
  • BIOL 169L JS - Marine Ecology


    CrsNo BIOL169L JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 173 PO - Genomics and Bioinformatics with Laboratory


    CrsNo BIOL173 PO


    When Offered: Spring 2014.

    Instructor(s): A. Cavalcanti

    Introduction to prokaryotic and eukaryotic genomes, biological information systems and data analysis. Topics: comparative genomics, biological databases, sequence alignment, similarity searching, phylogenetic reconstruction, models of evolution, genome remodeling and molecular visualization. Laboratory incorporates computer-based exercises and student research projects. Prerequisite: BIOL 041C PO  or BIOL 041E PO .

  
  • BIOL 175 JS - Applied Biostatistics


    CrsNo BIOL175 JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 176 JS - Tropical Ecology


    CrsNo BIOL176 JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 187P JS - Special Topics in Biology: Herpetology


    CrsNo BIOL187P JS


    See the Scripps College Catalog for a description of this course.

  
  • BIOL 189 PO - Topics in Cell Chemistry & Cell Biology


    CrsNo BIOL189 PO


    When Offered: Each semester.

    Instructor(s): Staff

    Selected Topics in Biology. Seminars, discussions and/or laboratory exercises conducted as small discussion groups in specialized topics not offered in formal courses and of mutual interest to students and staff. Prerequisite: permission of instructor. Course or half-course. May be repeated. Prerequisites: BIOL 040 PO .

  
  • BIOL 189B PO - Invasion Biology


    CrsNo BIOL189B PO


    When Offered: Fall 2013.

    Instructor(s): W. Meyer

    This seminar course will examine the primary literature to explore theories, models, patterns, and predictive methods relating to the introduction, establishment, and spread of introduced organisms. The focus will be on the application of principles of invasion biology to conservation and natural resource management. Letter grade only. Prerequisites: BIOL 041E PO .

  
  • BIOL 189E PO - Global Change Biology


    CrsNo BIOL189E PO


    When Offered: Fall 2012.

    Instructor(s): F. Hanzawa; N. Karnavsky

    Global Climate Change Biology. Relying on scientific literature, this course examines documented shifts in geographical ranges, seasonal phenology, community interactions, genetics, and extinctions related to global climate change. We will explore biological outcomes of major climatic events such as the last ice age, evolutionary and ecological patterns related to ongoing climate change, and attempts to predict biological consequences of future climate change. Prerequisite: BIOL 041E PO .

  
  • BIOL 191 PO - Senior Library Thesis


    CrsNo BIOL191 PO


    When Offered: Each semester.

    Instructor(s): Staff

    Design of a research protocol to answer an original question. Written in the form of a grant proposal. Open to students whose preliminary written project proposals have been approved by the department. Preliminary proposals due one week prior to pre-enrollment in the preceding semester. Half-course.

  
  • BIOL 194A PO - Experimental Senior Thesis (1st semester)


    CrsNo BIOL194A PO


    When Offered: Each fall.

    Instructor(s): Staff

    An experimental senior thesis may be undertaken by mutual agreement between a student and a faculty member and is dependent on design and availability of a suitable project and/or appropriate lab space. Suitable projects may include continuation of investigations begun in summer research or independent studies. Taken in two semesters for full course credit each semester; students who do not pass the first semester (BIOL194A, 1st semester) must complete a research grant proposal (BIOL191, half-course) in the second semester. Letter grade only.

  
  • BIOL 194B PO - Experimental Senior Thesis (2nd semester)


    CrsNo BIOL194B PO


    When Offered: Each spring.

    Instructor(s): Staff

    Continuation of the experimental senior thesis project in 194B requires the successful completion of BIOL194A; students who do not pass the first semester course must complete the Library Senior Thesis (BIOL191, half-course) in the second semester. Letter grade only.



  
  • BIOL 199DRPO - Biology: Directed Readings


    CrsNo BIOL199DRPO


    When Offered: Each semester.

    Instructor(s): Staff

    Syllabus reflects workload of a standard course in the department or program. Examinations or papers equivalent to a standard course. Regular interaction with the faculty supervisor. Weekly meetings are the norm. Available for full- or half-course credit.

  
  • BIOL 199IRPO - Biology: Independent Research


    CrsNo BIOL199IRPO


    When Offered: Each semester.

    Instructor(s): Staff

    A substantial and significant piece of original research or creative product produced. Pre-requisite course work required. Available for full- or half-course credit.

  
  • BIOL 199RAPO - Biology: Research Assistantship


    CrsNo BIOL199RAPO


    When Offered: Each semester.

    Instructor(s): Staff

    Lab notebook, research summary or other product appropriate to the discipline is required. Half-course credit only.


Chemistry

  
  • CHEM 001A PO - General Chemistry with Laboratory


    CrsNo CHEM001A PO


    When Offered: Each fall.

    Instructor(s): M. Arora; R. Garza; F. Grieman; M. Johal; R. Stolzberg; C. Taylor; A. Yu; Staff

    An introduction to basic thermodynamic, kinetic and structural principles; ionic equilibria; and the physical and chemical properties of the more common chemical elements and their compounds. Laboratory work is coordinated with the lecture and emphasizes quantitative analytical and instrumental techniques and molecular modeling. Interactive computing is an integral part of the second semester. High-school chemistry recommended.

  
  • CHEM 001B PO - General Chemistry with Laboratory


    CrsNo CHEM001B PO


    When Offered: Each spring.

    Instructor(s): M. Arora; R. Garza; F. Grieman; M. Johal; R. Stolzbergy; C. Taylor A. Yu; Staff

    An introduction to basic thermodynamic, kinetic and structural principles; ionic equilibria; and the physical and chemical properties of the more common chemical elements and their compounds. Laboratory work is coordinated with the lecture and emphasizes quantitative analytical and instrumental techniques and molecular modeling. Interactive computing is an integral part of the second semester. High-school chemistry recommended.

  
  • CHEM 007 PO - Chemistry of Food and Wine


    CrsNo CHEM007 PO


    When Offered: Offered alternate years; next offered spring 2013.

    Instructor(s): K. Sea

    The pleasure and the nourishment we derive from food and drink are both based on the chemical composition of our diets. We will focus in this class first on the chemical composition of wine and all the grape-growing and winemaking decisions which impact that composition. We will also discuss sensory analysis of wine and food. The food part of the class will then look at the chemical changes that take place during cooking, and how those changes influence our perception of and the nutritional value of food. This class is a non-majors class but additional reading will be offered for chemistry majors.

  
  • CHEM 051 PO - General Chemistry with Laboratory Accelerated


    CrsNo CHEM051 PO


    When Offered: Each fall.

    Instructor(s): M. Arora; R. Garza; M. Johal

    Accelerated introductory course for well-prepared students. Ionic equilibrium, atomic structure, molecular bonding and structure, chemical thermodynamics and chemical kinetics. Laboratory work emphasizes quantitative analytical and instrumental techniques and molecular modeling. Interactive computing is an integral part of the course. Prerequisite: two or more years of high school chemistry and a passing score on the placement examination.

  
  • CHEM 104 HM - Inorganic Chemistry


    CrsNo CHEM104 HM


    See the Harvey Mudd College Catalog for a description of this course.

  
  • CHEM 106 PO - Environmental Chemistry


    CrsNo CHEM106 PO


    When Offered: Spring 2014.

    Instructor(s): C. Taylor; D. Oxtoby

    An examination of environmental systems such as the atmosphere and the oceans from a molecular perspective. The course will critically examine chemical sources of environmental pollution and the means for remediation of these problems. Prerequisites: CHEM 001B PO  or CHEM 051 PO .

  
  • CHEM 110 HM - Inorganic Chemistry Laboratory


    CrsNo CHEM110 HM


    See the Harvey Mudd College Catalog for a description of this course.

  
  • CHEM 110A PO - Organic Chemistry with Laboratory


    CrsNo CHEM110A PO


    When Offered: Each fall.

    Instructor(s): K. Muzikar; D. O’Leary; M. Sazinsky; C. Selassie; T. Vasquez

    Organic Chemistry with Lab. A study of organic compounds, including synthesis and reaction mechanisms. Laboratory includes both synthesis and qualitative organic analysis. Prerequisite: CHEM 001A PO ; CHEM 001B PO  or CHEM 051 PO .

  
  • CHEM 110B PO - Organic Chemistry with Laboratory


    CrsNo CHEM110B PO


    When Offered: Each spring.

    Instructor(s): M. Arora; K. Muzikar; D. O’Leary; M. Sazinsky; C. Selassie; T. Vasquez

    A study of organic compounds, including synthesis and reaction mechanisms. Laboratory includes both synthesis and qualitative organic analysis. Prerequisite: CHEM 110A PO .

  
  • CHEM 115 PO - Biochemistry with Laboratory


    CrsNo CHEM115 PO


    When Offered: Each semester.

    Instructor(s): E. Crane; J. Liu; K. Muzikar; T. Negritto; M. Sazinsky; K. Sea

    Biological molecules considered in terms of their structure and roles in the dynamic processes by which energy and information are received, interconverted and transmitted in order to maintain life. Laboratory emphasizes techniques and instrumentation used to study the nature of biochemical molecules and processes. Prerequisite: CHEM 110A PO  and CHEM 110B PO .

  
  • CHEM 118 JS - Bioinorganic Chemistry


    CrsNo CHEM118 JS


    Biological cells require metals for a variety of functions. This course is an overview of the roles of metals in biology and medicine. The major emphasis of the course will be on the mechanism of metal-dependent enzymes. Half-course. Prerequisites: Biology 43L JS, Chemistry 117L JS.

  
  • CHEM 119 JS - Natural Products Chemistry


    CrsNo CHEM119 JS


    This course covers the field known as natural products chemistry. It will explore the main biological sources of natural products, methods for finding, classifying, and identifying potential pharmaceuticals, and the biochemical basis for the production of these compounds through the use of lectures, case studies, and hands-on experience in the laboratory. Half-course. Prerequisite: Chemistry 117L JS.

  
  • CHEM 128 JS - Inorganic Chemistry


    CrsNo CHEM128 JS


    A survey of the bonding, structure, reactions, mechanisms, and properties of inorganic compounds. Special emphasis will be placed upon transition metal chemistry. Topics will include elementary group theory, atomic structure, ionic and covalent bonding, spectroscopy, molecular orbital theory, periodic trends, bioinorganic chemistry, and organometallic chemistry. Prerequisites Chemistry 117 JS and 121 JS. (121 may be taken concurrently).

  
  • CHEM 130L JS - Inorganic Synthesis


    CrsNo CHEM130L JS


    This laboratory course will include a variety of synthetic techniques for inorganic compounds. Emphasis will be on transition metal complexes, including organometallic compounds, and some main group compounds will also be prepared. Students will use appropriate spectroscopic methods and chromatography to characterize products. Use of original journal references will be stressed. Prerequisites: Chemistry 117 JS and 121 JS (121 may be taken concurrently). One-half course credit. Laboratory fee.

  
  • CHEM 139 JS - Environmental Chemistry


    CrsNo CHEM139 JS


    See the Scripps College Catalog for a description of this course.

  
  • CHEM 147 PO - Inorganic Chemistry


    CrsNo CHEM147 PO


    When Offered: Last offered spring 2011.

    Instructor(s): Staff

    Inorganic chemistry is a lecture based class that includes descriptive chemistry of the elements (s, p and d blocks) as well as a variety of advanced topics such as electronic structures, symmetry, molecular orbital theory, acid/base chemistry, bonding and structure of solids, organometallics and catalysis. Letter grade only.Prerequisites: CHEM 001B PO  and CHEM 110B PO  or CHEM 051 PO  and CHEM 110B PO .

  
  • CHEM 156 PO - Physical Chemistry in Molecular Biology


    CrsNo CHEM156 PO


    When Offered: Each spring.

    Instructor(s): M. Johal

    The application of physical chemistry to biochemistry and molecular biology. A study of chemical thermodynamics, chemical kinetics, and spectroscopy related to the determination of molecular structure and molecular interactions. Prerequisite: CHEM 110B PO  and either MATH 031 PO , MATH 031S PO , MATH 032 PO , MATH 032S PO  or MATH 060 PO .

  
  
  
  • CHEM 161 HM - Classical & Stats Thermodynamics


    CrsNo CHEM161 HM


    See the Harvey Mudd College Catalog for a description of this course.

  
  • CHEM 161 PO - Advanced Analytical Chemistry with Laboratory


    CrsNo CHEM161 PO


    When Offered: Each fall.

    Instructor(s): M. Arora; R. Stolzberg; C. Taylor

    Study of modern instrumental methods of analysis with an emphasis on optical and X-ray spectroscopy, mass spectrometry, and high performance gas and liquid chromatography. Efficient experimental designs are used to make multivariate investigations by students working in formal groups. Prerequisite: CHEM 110A PO.

  
  • CHEM 162 PO - Advanced Physical Chemistry with Laboratory


    CrsNo CHEM162 PO


    When Offered: Each spring.

    Instructor(s): M. Johal; M. Arora; R. Garza

    Advanced physical chemistry topics chosen from the areas of statistical thermodynamics, group theory, chemical kinetics, molecular modeling and solid state chemistry. Laboratory emphasis on modern instrumental methods, including molecular spectroscopy, powder X-ray diffraction, nuclear magnetic resonance, chemical kinetics and gas-phase adsorption. Prerequisite: CHEM 158A PO .

  
  • CHEM 164 PO - Computational Chemistry


    CrsNo CHEM164 PO


    When Offered: Offered alternate years; next offered fall 2013.

    Instructor(s): L. Johnson

    Introduction to the theory and practice of computational chemistry, including numerical methods, molecular mechanics/dynamics, and electronic structure calculations. Model chemistries will be discussed and compared in lecture along with their range of applicability. Laboratory exercises emphasize learning how to apply a variety of commercial and free software to chemical problems in biochemistry and materials chemistry.  Lecture with 3-4 laboratory exercises. Prerequisites: MATH 032 PO  or MATH 060 PO ; one year of physics. Co-requisites: CHEM 158A PO  or by instructor permission.

  
  • CHEM 166 HM - Industrial Chemistry


    CrsNo CHEM166 HM


    See the Harvey Mudd College Catalog for a description of this course.

  
  • CHEM 168 HM - Special Topics Physical Chemistry


    CrsNo CHEM168 HM


    See the Harvey Mudd College Catalog for a description of this course.

  
  • CHEM 171 PO - Organic Synthesis


    CrsNo CHEM171 PO


    When Offered: Last offered fall 2011.

    Instructor(s): Staff

    A lecture course emphasizing the design and evaluation of synthetic routes to organic molecules. Prerequisite: CHEM 110B PO . Half-course.

  
  • CHEM 172 PO - NMR Spectroscopy


    CrsNo CHEM172 PO


    When Offered: Spring 2014.

    Instructor(s): D. O’Leary

    Examines fundamental concepts in nuclear magnetic resonance with a focus on spectroscopic techniques used for organic structure elucidation and conformational analysis. Hands-on experience with data collection and analysis. Prerequisite: CHEM 110A PO . Letter grade only. Half-course.

  
  • CHEM 173 HM - Advanced Organic Chemistry: Pericyclics


    CrsNo CHEM173 HM


    See the Harvey Mudd College Catalog for a description of this course.

  
  • CHEM 174 PO - Bio-Organic Chemistry


    CrsNo CHEM174 PO


    When Offered: Fall 2013.

    Instructor(s): C. Selassie

    Basis for a clearer understanding of the structures of organic compounds, the mechanisms of organic reactions and how they fuse together at the molecular and cellular level. Examples drawn from drug and pesticide design, as well as environmental toxicology. Interactive computing using specific software is an integral part of the course. Prerequisites: CHEM 110B PO . Letter grade only. Half-course.

  
  • CHEM 175 PO - Introduction to Medicinal Chemistry


    CrsNo CHEM175 PO


    When Offered: Fall 2012.

    Instructor(s): C. Selassie

    An interdisciplinary course provides a basic understanding of the key underlying mechanistic principles of drug interactions at the molecular and cellular level. Topics include physicochemical principles of drug design and action, receptor-effectors theories, receptor characterization, DNA interactions, drug distribution and metabolism, as well as pro-drug chemistry. Lecture/Computational Lab.Prerequisite: CHEM 110B PO .

  
  • CHEM 180 PO - Advanced Biochemistry


    CrsNo CHEM180 PO


    When Offered: Each spring.

    Instructor(s): E. Crane; M. Sazinsky

    An examination of biochemical catalysis with an emphasis on enzyme mechanisms and techniques used in their elucidation. Current primary literature is studied to gain an understanding of what is known and perhaps more importantly, not known, about catalysis in chemistry and enzymology. Prerequisite: CHEM 115 PO .

  
  • CHEM 181 PO - Chemical Biology


    CrsNo CHEM181 PO


    When Offered: Offered alternate years; next offered spring 2013.

    Instructor(s): J. Liu

    This course, which builds on foundations in both chemistry and molecular biology, will address the following questions: (1) What is chemical biology and (2) What can chemical biology do to advance science and human health? Students will consider varying definitions of “chemical biology” and explore examples of each of these views. Topics may include small molecule screens to decipher biological networks, genetic control with small molecules, directed evolution, self-replication, and approaches towards next-generation antimicrobials. Letter grade only. Prerequisite: CHEM 115 PO .

  
  • CHEM 182 HM - Chemistry in Living Systems


    CrsNo CHEM182 HM


    See the Harvey Mudd College Catalog for a description of this course.

 

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